Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/human/results/FF_0000031/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 1253, Total Background Sequences = 1257
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-43-9.932e+010.0000865.069.03%624.449.68%motif file (matrix) pdf
2Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-41-9.444e+010.0000292.023.30%127.010.11%motif file (matrix) pdf
3ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-38-8.844e+010.0000771.061.53%543.043.20%motif file (matrix) pdf
4ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-36-8.376e+010.0000881.070.31%662.752.73%motif file (matrix) pdf
5ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-33-7.793e+010.0000913.072.87%705.356.11%motif file (matrix) pdf
6EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-33-7.700e+010.0000790.063.05%577.645.96%motif file (matrix) pdf
7EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-30-7.118e+010.0000497.039.66%310.224.68%motif file (matrix) pdf
8EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-29-6.841e+010.0000493.039.35%310.924.73%motif file (matrix) pdf
9GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-27-6.402e+010.0000702.056.03%509.640.55%motif file (matrix) pdf
10PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-26-6.173e+010.0000385.030.73%227.918.13%motif file (matrix) pdf
11SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-19-4.431e+010.0000644.051.40%486.638.71%motif file (matrix) pdf
12Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-16-3.861e+010.0000592.047.25%447.135.58%motif file (matrix) pdf
13ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-14-3.434e+010.0000501.039.98%370.529.48%motif file (matrix) pdf
14SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-14-3.393e+010.0000207.016.52%118.99.46%motif file (matrix) pdf
15RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-13-3.219e+010.0000505.040.30%379.030.15%motif file (matrix) pdf
16IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-13-3.168e+010.0000121.09.66%57.74.59%motif file (matrix) pdf
17ETS(ETS)/Promoter/Homer1e-13-3.137e+010.0000382.030.49%268.621.37%motif file (matrix) pdf
18ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-12-2.978e+010.0000538.042.94%414.632.99%motif file (matrix) pdf
19RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-12-2.877e+010.0000363.028.97%256.720.43%motif file (matrix) pdf
20Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-11-2.747e+010.0000588.046.93%467.437.19%motif file (matrix) pdf
21STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-10-2.385e+010.0000451.035.99%346.927.60%motif file (matrix) pdf
22ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-10-2.361e+010.000068.05.43%28.12.24%motif file (matrix) pdf
23Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-10-2.342e+010.0000401.032.00%301.924.02%motif file (matrix) pdf
24IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-9-2.156e+010.000098.07.82%50.34.00%motif file (matrix) pdf
25STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-9-2.090e+010.0000180.014.37%114.29.09%motif file (matrix) pdf
26JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-8-1.953e+010.000084.06.70%42.53.38%motif file (matrix) pdf
27IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-8-1.914e+010.0000242.019.31%169.913.52%motif file (matrix) pdf
28PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-7-1.780e+010.0000316.025.22%237.618.90%motif file (matrix) pdf
29STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-7-1.742e+010.0000161.012.85%105.08.35%motif file (matrix) pdf
30Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-7-1.701e+010.0000215.017.16%150.912.01%motif file (matrix) pdf
31Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-7-1.635e+010.0000311.024.82%237.018.85%motif file (matrix) pdf
32ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-7-1.634e+010.0000114.09.10%68.35.43%motif file (matrix) pdf
33PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-6-1.581e+010.0000690.055.07%600.447.77%motif file (matrix) pdf
34HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-6-1.522e+010.000090.07.18%51.24.07%motif file (matrix) pdf
35Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-6-1.477e+010.0000212.016.92%152.212.11%motif file (matrix) pdf
36MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-6-1.443e+010.0000784.062.57%700.755.76%motif file (matrix) pdf
37CRE(bZIP)/Promoter/Homer1e-6-1.419e+010.0000222.017.72%162.212.90%motif file (matrix) pdf
38Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-6-1.406e+010.0000935.074.62%859.768.41%motif file (matrix) pdf
39Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-5-1.377e+010.0000682.054.43%599.647.71%motif file (matrix) pdf
40Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-5-1.375e+010.0000988.078.85%917.973.03%motif file (matrix) pdf
41Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-5-1.351e+010.0000142.011.33%95.17.57%motif file (matrix) pdf
42MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-5-1.347e+010.0000480.038.31%402.832.05%motif file (matrix) pdf
43STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-5-1.225e+010.0000246.019.63%188.214.97%motif file (matrix) pdf
44Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-5-1.202e+010.0000117.09.34%77.66.17%motif file (matrix) pdf
45RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-5-1.186e+010.0000355.028.33%289.523.03%motif file (matrix) pdf
46MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-5-1.183e+010.0000372.029.69%305.624.32%motif file (matrix) pdf
47NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-5-1.176e+010.000055.04.39%29.52.34%motif file (matrix) pdf
48NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-5-1.171e+010.0000781.062.33%708.056.33%motif file (matrix) pdf
49Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-5-1.170e+010.0000615.049.08%540.443.00%motif file (matrix) pdf
50Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-5-1.170e+010.0000261.020.83%203.416.18%motif file (matrix) pdf
51T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer1e-5-1.152e+010.00018.00.64%0.90.07%motif file (matrix) pdf
52AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-1.067e+010.0001272.021.71%216.317.21%motif file (matrix) pdf
53Sp1(Zf)/Promoter/Homer1e-4-1.063e+010.0001517.041.26%448.435.67%motif file (matrix) pdf
54BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-4-1.054e+010.0001243.019.39%190.315.14%motif file (matrix) pdf
55RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-4-1.044e+010.0001367.029.29%305.424.30%motif file (matrix) pdf
56Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-4-1.024e+010.000280.06.38%50.54.02%motif file (matrix) pdf
57PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-4-9.917e+000.000293.07.42%61.04.86%motif file (matrix) pdf
58STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-4-9.825e+000.0002244.019.47%193.715.41%motif file (matrix) pdf
59SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-4-9.534e+000.00031179.094.09%1145.391.13%motif file (matrix) pdf
60MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-4-9.424e+000.0004561.044.77%496.539.50%motif file (matrix) pdf
61Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-4-9.421e+000.0004123.09.82%87.66.97%motif file (matrix) pdf
62Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-3-9.163e+000.0004746.059.54%682.854.33%motif file (matrix) pdf
63Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-3-8.960e+000.0005218.017.40%172.613.73%motif file (matrix) pdf
64E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-3-8.675e+000.0007523.041.74%462.336.78%motif file (matrix) pdf
65RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-3-8.610e+000.0007615.049.08%553.744.05%motif file (matrix) pdf
66CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-3-8.598e+000.0007296.023.62%245.819.56%motif file (matrix) pdf
67PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-3-8.593e+000.0007268.021.39%219.417.45%motif file (matrix) pdf
68AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-3-8.591e+000.0007679.054.19%617.149.10%motif file (matrix) pdf
69Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-3-8.584e+000.0007644.051.40%582.846.37%motif file (matrix) pdf
70Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-8.562e+000.0007102.08.14%71.15.66%motif file (matrix) pdf
71X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-3-8.335e+000.000970.05.59%45.83.64%motif file (matrix) pdf
72NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-3-8.329e+000.0009410.032.72%354.728.22%motif file (matrix) pdf
73RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-3-8.218e+000.001071.05.67%46.53.70%motif file (matrix) pdf
74EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-3-7.979e+000.0012696.055.55%637.250.70%motif file (matrix) pdf
75NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-3-7.832e+000.0014237.018.91%193.315.38%motif file (matrix) pdf
76Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-7.776e+000.00151053.084.04%1009.580.32%motif file (matrix) pdf
77Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-3-7.176e+000.002670.05.59%47.53.78%motif file (matrix) pdf
78Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-3-7.091e+000.0028550.043.89%496.839.53%motif file (matrix) pdf
79Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer1e-2-6.874e+000.0035115.09.18%86.86.91%motif file (matrix) pdf
80Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-6.859e+000.0035328.026.18%282.522.48%motif file (matrix) pdf
81Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-2-6.688e+000.0041225.017.96%186.214.82%motif file (matrix) pdf
82Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-2-6.629e+000.0043585.046.69%534.042.49%motif file (matrix) pdf
83GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-2-6.475e+000.004966.05.27%45.73.63%motif file (matrix) pdf
84Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-2-6.467e+000.0049983.078.45%940.974.86%motif file (matrix) pdf
85GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-2-6.388e+000.0052109.08.70%82.46.56%motif file (matrix) pdf
86HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-2-6.342e+000.0054102.08.14%76.96.12%motif file (matrix) pdf
87Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-2-6.182e+000.0063141.011.25%111.48.86%motif file (matrix) pdf
88E2F(E2F)/Hela-CellCycle-Expression/Homer1e-2-6.178e+000.006376.06.07%54.24.31%motif file (matrix) pdf
89NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-2-6.149e+000.0063332.026.50%289.723.05%motif file (matrix) pdf
90Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-6.124e+000.0064133.010.61%105.08.35%motif file (matrix) pdf
91Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-2-6.058e+000.0068203.016.20%168.113.37%motif file (matrix) pdf
92ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer1e-2-6.037e+000.0069117.09.34%90.87.22%motif file (matrix) pdf
93NFY(CCAAT)/Promoter/Homer1e-2-5.890e+000.0079421.033.60%376.329.94%motif file (matrix) pdf
94BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-2-5.696e+000.0094661.052.75%614.048.86%motif file (matrix) pdf
95Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-2-5.681e+000.0095363.028.97%322.025.62%motif file (matrix) pdf
96NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer1e-2-5.541e+000.0108131.010.45%104.48.31%motif file (matrix) pdf
97EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-2-5.384e+000.0125184.014.68%153.812.24%motif file (matrix) pdf
98CHR(?)/Hela-CellCycle-Expression/Homer1e-2-5.378e+000.0125303.024.18%265.121.09%motif file (matrix) pdf
99CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-2-5.069e+000.0168137.010.93%111.58.87%motif file (matrix) pdf
100TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer1e-2-5.017e+000.017553.04.23%37.83.01%motif file (matrix) pdf
101Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-2-5.016e+000.0175762.060.81%720.757.34%motif file (matrix) pdf
102TATA-Box(TBP)/Promoter/Homer1e-2-4.998e+000.0175520.041.50%478.938.10%motif file (matrix) pdf
103E-box(bHLH)/Promoter/Homer1e-2-4.619e+000.025382.06.54%63.95.09%motif file (matrix) pdf