Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/human/results/FF_10066-101I3/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 961, Total Background Sequences = 966
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-13-3.194e+010.0000453.047.14%339.635.17%motif file (matrix) pdf
2Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-13-3.115e+010.0000789.082.10%691.471.62%motif file (matrix) pdf
3TATA-Box(TBP)/Promoter/Homer1e-10-2.421e+010.0000424.044.12%327.233.89%motif file (matrix) pdf
4Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-7-1.822e+010.0000530.055.15%445.446.13%motif file (matrix) pdf
5TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-7-1.676e+010.0000194.020.19%134.813.96%motif file (matrix) pdf
6Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-7-1.647e+010.0000494.051.40%414.742.95%motif file (matrix) pdf
7SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-7-1.614e+010.0000926.096.36%891.092.28%motif file (matrix) pdf
8Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-6-1.474e+010.0000118.012.28%74.17.67%motif file (matrix) pdf
9TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-6-1.396e+010.0000215.022.37%158.016.37%motif file (matrix) pdf
10CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-5-1.373e+010.0000121.012.59%78.88.16%motif file (matrix) pdf
11PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-5-1.243e+010.0001220.022.89%167.017.29%motif file (matrix) pdf
12Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-5-1.211e+010.0001355.036.94%292.730.32%motif file (matrix) pdf
13Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-4-1.119e+010.0003201.020.92%152.815.83%motif file (matrix) pdf
14PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-4-1.114e+010.000347.04.89%24.22.50%motif file (matrix) pdf
15MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-4-1.075e+010.0004507.052.76%445.446.14%motif file (matrix) pdf
16TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-4-1.046e+010.0005301.031.32%247.025.58%motif file (matrix) pdf
17Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-4-1.023e+010.0006536.055.78%476.749.38%motif file (matrix) pdf
18Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-4-9.912e+000.0007107.011.13%73.77.63%motif file (matrix) pdf
19NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-4-9.267e+000.0013365.037.98%311.932.30%motif file (matrix) pdf
20ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer1e-3-9.122e+000.001440.04.16%21.92.27%motif file (matrix) pdf
21NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-3-9.090e+000.0014259.026.95%211.721.92%motif file (matrix) pdf
22GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-3-8.608e+000.002246.04.79%26.52.75%motif file (matrix) pdf
23Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-3-8.443e+000.0025661.068.78%612.063.39%motif file (matrix) pdf
24Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-3-8.434e+000.0025340.035.38%290.730.11%motif file (matrix) pdf
25Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-3-8.421e+000.0025478.049.74%425.144.03%motif file (matrix) pdf
26Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-8.202e+000.0028464.048.28%413.042.78%motif file (matrix) pdf
27AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-3-7.869e+000.0037846.088.03%812.784.18%motif file (matrix) pdf
28Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-3-7.413e+000.0057184.019.15%147.415.26%motif file (matrix) pdf
29BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-3-7.231e+000.0066157.016.34%123.712.82%motif file (matrix) pdf
30HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson et al.)/Homer1e-3-7.223e+000.006629.03.02%15.31.59%motif file (matrix) pdf
31Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-3-6.917e+000.008457.05.93%37.63.90%motif file (matrix) pdf
32IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-2-6.391e+000.013851.05.31%33.13.43%motif file (matrix) pdf
33Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-2-6.384e+000.0138478.049.74%434.244.97%motif file (matrix) pdf
34bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-2-6.331e+000.0138143.014.88%113.611.76%motif file (matrix) pdf
35Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-2-6.286e+000.0140566.058.90%523.154.18%motif file (matrix) pdf
36Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-2-6.069e+000.0170757.078.77%722.174.79%motif file (matrix) pdf
37Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-2-6.063e+000.0170164.017.07%133.313.81%motif file (matrix) pdf
38NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-5.872e+000.019656.05.83%38.94.03%motif file (matrix) pdf
39PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-2-5.773e+000.0210191.019.88%159.716.54%motif file (matrix) pdf
40RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-5.771e+000.0210177.018.42%146.415.17%motif file (matrix) pdf
41STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-2-5.750e+000.0210178.018.52%147.315.26%motif file (matrix) pdf
42Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-2-5.622e+000.0227372.038.71%333.434.53%motif file (matrix) pdf
43Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer1e-2-5.438e+000.0267141.014.67%114.111.81%motif file (matrix) pdf
44Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-2-5.315e+000.029563.06.56%45.34.69%motif file (matrix) pdf
45Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-2-5.175e+000.0332128.013.32%103.810.75%motif file (matrix) pdf
46Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer1e-2-5.123e+000.0342217.022.58%186.319.29%motif file (matrix) pdf
47Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-2-5.024e+000.0370246.025.60%214.422.21%motif file (matrix) pdf
48Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-2-5.020e+000.0370270.028.10%237.924.64%motif file (matrix) pdf
49Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-4.956e+000.037985.08.84%65.26.75%motif file (matrix) pdf
50Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer1e-2-4.901e+000.039349.05.10%34.13.53%motif file (matrix) pdf
51EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-2-4.857e+000.0402141.014.67%116.612.07%motif file (matrix) pdf
52FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong et al.)/Homer1e-2-4.639e+000.0491200.020.81%172.517.87%motif file (matrix) pdf
53Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-2-4.607e+000.0497572.059.52%538.655.79%motif file (matrix) pdf