Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/human/results/FF_10189-103D9/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 832, Total Background Sequences = 827
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-24-5.693e+010.0000170.020.43%72.88.80%motif file (matrix) pdf
2Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-23-5.326e+010.0000188.022.60%87.610.59%motif file (matrix) pdf
3PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-18-4.196e+010.0000276.033.17%166.320.11%motif file (matrix) pdf
4EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-16-3.753e+010.0000477.057.33%355.242.95%motif file (matrix) pdf
5ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-14-3.278e+010.0000575.069.11%463.155.99%motif file (matrix) pdf
6ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-14-3.272e+010.0000315.037.86%212.225.66%motif file (matrix) pdf
7SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-14-3.261e+010.0000805.096.75%741.689.67%motif file (matrix) pdf
8ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-13-3.203e+010.0000458.055.05%346.241.86%motif file (matrix) pdf
9EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-13-3.023e+010.0000297.035.70%200.324.22%motif file (matrix) pdf
10SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-11-2.569e+010.0000386.046.39%290.035.06%motif file (matrix) pdf
11Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-10-2.517e+010.0000620.074.52%526.863.69%motif file (matrix) pdf
12ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-10-2.306e+010.0000534.064.18%440.153.21%motif file (matrix) pdf
13PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-9-2.252e+010.0000188.022.60%119.214.42%motif file (matrix) pdf
14EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-9-2.240e+010.0000506.060.82%413.850.03%motif file (matrix) pdf
15PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer1e-9-2.152e+010.0000216.025.96%144.717.50%motif file (matrix) pdf
16GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-9-2.110e+010.0000395.047.48%307.137.13%motif file (matrix) pdf
17Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-8-2.010e+010.0000307.036.90%227.427.50%motif file (matrix) pdf
18ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-8-1.859e+010.000040.04.81%14.91.80%motif file (matrix) pdf
19EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-7-1.786e+010.0000252.030.29%182.822.10%motif file (matrix) pdf
20Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-7-1.776e+010.0000466.056.01%384.446.48%motif file (matrix) pdf
21Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-7-1.775e+010.0000667.080.17%594.271.85%motif file (matrix) pdf
22IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-7-1.765e+010.000073.08.77%36.74.44%motif file (matrix) pdf
23STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-7-1.760e+010.0000311.037.38%236.528.59%motif file (matrix) pdf
24PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-6-1.585e+010.0000460.055.29%383.946.42%motif file (matrix) pdf
25Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-6-1.576e+010.0000277.033.29%210.025.39%motif file (matrix) pdf
26NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-6-1.508e+010.000035.04.21%14.01.69%motif file (matrix) pdf
27Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-6-1.482e+010.0000401.048.20%328.839.76%motif file (matrix) pdf
28BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-6-1.446e+010.0000178.021.39%124.815.09%motif file (matrix) pdf
29RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-6-1.440e+010.0000320.038.46%252.430.52%motif file (matrix) pdf
30Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-5-1.227e+010.0000259.031.13%201.324.34%motif file (matrix) pdf
31AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-5-1.222e+010.0000745.089.54%696.384.18%motif file (matrix) pdf
32AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-5-1.213e+010.0000519.062.38%453.354.81%motif file (matrix) pdf
33RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer1e-5-1.185e+010.0001237.028.49%182.422.05%motif file (matrix) pdf
34Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-5-1.154e+010.0001423.050.84%359.543.47%motif file (matrix) pdf
35REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-4-1.147e+010.00018.00.96%0.50.06%motif file (matrix) pdf
36Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-4-1.131e+010.000177.09.25%46.55.62%motif file (matrix) pdf
37Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-4-1.095e+010.0001181.021.75%134.916.31%motif file (matrix) pdf
38Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-4-1.058e+010.0002148.017.79%106.012.82%motif file (matrix) pdf
39STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-4-1.045e+010.0002110.013.22%74.89.05%motif file (matrix) pdf
40NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-4-1.044e+010.0002545.065.50%485.458.70%motif file (matrix) pdf
41STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-4-1.024e+010.0002125.015.02%87.010.52%motif file (matrix) pdf
42STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-4-1.010e+010.0003164.019.71%121.414.68%motif file (matrix) pdf
43Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-4-1.008e+010.0003222.026.68%173.520.97%motif file (matrix) pdf
44Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-4-9.652e+000.0004556.066.83%499.960.44%motif file (matrix) pdf
45Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-4-9.631e+000.0004101.012.14%68.58.29%motif file (matrix) pdf
46NFY(CCAAT)/Promoter/Homer1e-4-9.411e+000.0005245.029.45%196.623.77%motif file (matrix) pdf
47Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-4-9.368e+000.000562.07.45%37.84.57%motif file (matrix) pdf
48Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-3-9.028e+000.0007152.018.27%113.313.70%motif file (matrix) pdf
49STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-3-8.871e+000.0008164.019.71%124.715.08%motif file (matrix) pdf
50MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-3-8.595e+000.0010323.038.82%272.132.90%motif file (matrix) pdf
51RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-3-8.528e+000.0010154.018.51%116.514.09%motif file (matrix) pdf
52GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer1e-3-8.370e+000.001264.07.69%40.54.90%motif file (matrix) pdf
53E2F(E2F)/Hela-CellCycle-Expression/Homer1e-3-7.836e+000.002037.04.45%20.92.53%motif file (matrix) pdf
54TATA-Box(TBP)/Promoter/Homer1e-3-7.649e+000.0023363.043.63%314.438.02%motif file (matrix) pdf
55OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-3-7.622e+000.002455.06.61%34.64.18%motif file (matrix) pdf
56AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-7.581e+000.0024190.022.84%151.418.31%motif file (matrix) pdf
57CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-3-7.464e+000.0027118.014.18%87.510.58%motif file (matrix) pdf
58GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer1e-3-7.399e+000.002843.05.17%25.33.05%motif file (matrix) pdf
59IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-3-7.260e+000.0031148.017.79%114.013.79%motif file (matrix) pdf
60RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-3-7.256e+000.003114.01.68%5.20.63%motif file (matrix) pdf
61MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-3-7.213e+000.0032392.047.12%344.541.65%motif file (matrix) pdf
62PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-3-7.120e+000.0034528.063.46%480.958.15%motif file (matrix) pdf
63Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-3-7.077e+000.0035515.061.90%467.556.53%motif file (matrix) pdf
64ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-3-6.986e+000.003871.08.53%48.25.83%motif file (matrix) pdf
65IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-3-6.985e+000.003850.06.01%31.53.81%motif file (matrix) pdf
66Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-6.644e+000.005295.011.42%69.48.39%motif file (matrix) pdf
67Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-2-6.478e+000.0061131.015.75%101.812.30%motif file (matrix) pdf
68Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-2-6.432e+000.0062261.031.37%221.526.78%motif file (matrix) pdf
69NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-6.163e+000.0081262.031.49%223.026.97%motif file (matrix) pdf
70Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-2-6.018e+000.009216.01.92%7.20.87%motif file (matrix) pdf
71EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-2-5.820e+000.0110130.015.62%102.312.36%motif file (matrix) pdf
72Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-2-5.815e+000.011080.09.62%58.87.10%motif file (matrix) pdf
73GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer1e-2-5.705e+000.012045.05.41%29.63.58%motif file (matrix) pdf
74Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan et al.)/Homer1e-2-5.678e+000.0122462.055.53%420.350.82%motif file (matrix) pdf
75Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-2-5.678e+000.0122463.055.65%421.851.00%motif file (matrix) pdf
76E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-2-5.660e+000.0122340.040.87%300.336.32%motif file (matrix) pdf
77bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer1e-2-5.617e+000.0125147.017.67%118.314.31%motif file (matrix) pdf
78PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-2-5.263e+000.0175375.045.07%336.840.72%motif file (matrix) pdf
79Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-2-5.221e+000.018144.05.29%29.93.61%motif file (matrix) pdf
80NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-5.098e+000.020257.06.85%40.54.89%motif file (matrix) pdf
81RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-2-4.998e+000.0220221.026.56%189.822.95%motif file (matrix) pdf
82Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-2-4.921e+000.0235422.050.72%384.746.52%motif file (matrix) pdf
83Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer1e-2-4.793e+000.026476.09.13%57.66.96%motif file (matrix) pdf
84Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-2-4.621e+000.0309389.046.75%353.042.69%motif file (matrix) pdf