Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/human/results/FF_10202-103F4/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 788, Total Background Sequences = 784
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-12-2.979e+010.0000285.036.17%191.624.45%motif file (matrix) pdf
2Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-11-2.664e+010.0000570.072.34%474.860.58%motif file (matrix) pdf
3Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-11-2.547e+010.0000620.078.68%531.867.85%motif file (matrix) pdf
4MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-10-2.432e+010.0000417.052.92%323.241.24%motif file (matrix) pdf
5SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-9-2.160e+010.0000361.045.81%275.135.10%motif file (matrix) pdf
6Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-9-2.093e+010.0000125.015.86%71.69.13%motif file (matrix) pdf
7Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-8-1.909e+010.0000253.032.11%181.823.20%motif file (matrix) pdf
8EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-8-1.866e+010.0000483.061.29%401.551.23%motif file (matrix) pdf
9HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-7-1.838e+010.0000162.020.56%104.613.34%motif file (matrix) pdf
10AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-7-1.786e+010.0000527.066.88%448.357.19%motif file (matrix) pdf
11Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-7-1.757e+010.0000415.052.66%336.842.97%motif file (matrix) pdf
12ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-7-1.753e+010.0000498.063.20%419.753.54%motif file (matrix) pdf
13E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-7-1.690e+010.0000578.073.35%504.364.34%motif file (matrix) pdf
14Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-6-1.600e+010.0000411.052.16%336.242.89%motif file (matrix) pdf
15MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-6-1.596e+010.0000336.042.64%264.633.75%motif file (matrix) pdf
16Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer1e-6-1.563e+010.0000165.020.94%111.314.21%motif file (matrix) pdf
17AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-6-1.480e+010.0000704.089.34%650.883.02%motif file (matrix) pdf
18Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-6-1.429e+010.0000698.088.58%644.582.22%motif file (matrix) pdf
19RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer1e-6-1.412e+010.0000132.016.75%86.911.08%motif file (matrix) pdf
20Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer1e-5-1.374e+010.0000413.052.41%344.543.95%motif file (matrix) pdf
21Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer1e-5-1.367e+010.000090.011.42%53.36.80%motif file (matrix) pdf
22SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-5-1.351e+010.0000754.095.69%715.591.28%motif file (matrix) pdf
23PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-5-1.317e+010.0000192.024.37%139.217.76%motif file (matrix) pdf
24CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-5-1.232e+010.000094.011.93%58.57.46%motif file (matrix) pdf
25ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-5-1.207e+010.0001272.034.52%214.827.40%motif file (matrix) pdf
26EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-5-1.204e+010.0001236.029.95%181.723.17%motif file (matrix) pdf
27Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-4-1.134e+010.0001620.078.68%564.271.98%motif file (matrix) pdf
28EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-4-1.080e+010.0002125.015.86%86.911.09%motif file (matrix) pdf
29TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-4-1.073e+010.0002170.021.57%125.916.07%motif file (matrix) pdf
30E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-4-1.029e+010.0003548.069.54%491.462.68%motif file (matrix) pdf
31SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-4-9.942e+000.0004110.013.96%75.59.64%motif file (matrix) pdf
32Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-4-9.905e+000.0004395.050.13%338.143.13%motif file (matrix) pdf
33PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer1e-4-9.757e+000.0005100.012.69%67.18.55%motif file (matrix) pdf
34PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-4-9.625e+000.0005354.044.92%300.038.27%motif file (matrix) pdf
35NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-4-9.617e+000.0005217.027.54%170.321.73%motif file (matrix) pdf
36RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer1e-4-9.569e+000.0005273.034.64%222.628.40%motif file (matrix) pdf
37EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-4-9.260e+000.0007407.051.65%352.344.95%motif file (matrix) pdf
38PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-3-8.845e+000.0010157.019.92%118.815.16%motif file (matrix) pdf
39STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-3-8.845e+000.0010157.019.92%118.015.06%motif file (matrix) pdf
40RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer1e-3-8.652e+000.001217.02.16%6.20.80%motif file (matrix) pdf
41Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-3-8.643e+000.001249.06.22%28.83.67%motif file (matrix) pdf
42EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-3-8.461e+000.0013221.028.05%177.122.59%motif file (matrix) pdf
43ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-3-8.347e+000.0015449.056.98%397.050.65%motif file (matrix) pdf
44KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-3-8.317e+000.0015597.075.76%549.870.14%motif file (matrix) pdf
45Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer1e-3-8.294e+000.0015112.014.21%81.010.33%motif file (matrix) pdf
46ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-3-8.159e+000.001629.03.68%14.51.85%motif file (matrix) pdf
47PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-3-8.138e+000.0016485.061.55%434.055.37%motif file (matrix) pdf
48IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-3-8.071e+000.0017123.015.61%90.611.56%motif file (matrix) pdf
49ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-3-7.799e+000.0022370.046.95%321.941.07%motif file (matrix) pdf
50MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer1e-3-7.794e+000.0022236.029.95%193.224.65%motif file (matrix) pdf
51TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-3-7.575e+000.0027181.022.97%143.618.32%motif file (matrix) pdf
52BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-3-7.474e+000.0029153.019.42%118.615.13%motif file (matrix) pdf
53Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer1e-3-7.456e+000.0029185.023.48%147.618.84%motif file (matrix) pdf
54GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-7.255e+000.003514.01.78%5.30.68%motif file (matrix) pdf
55TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-3-7.105e+000.0039258.032.74%216.227.58%motif file (matrix) pdf
56NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-6.759e+000.0055187.023.73%151.919.37%motif file (matrix) pdf
57Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-2-6.670e+000.0059316.040.10%273.234.86%motif file (matrix) pdf
58Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-2-6.583e+000.0063362.045.94%318.740.66%motif file (matrix) pdf
59NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-2-6.529e+000.006524.03.05%13.01.66%motif file (matrix) pdf
60Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-2-6.395e+000.0073483.061.29%439.756.10%motif file (matrix) pdf
61Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-2-6.164e+000.0091151.019.16%120.715.39%motif file (matrix) pdf
62Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-2-6.138e+000.0092122.015.48%94.312.03%motif file (matrix) pdf
63STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-2-6.052e+000.0099144.018.27%114.214.57%motif file (matrix) pdf
64Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-5.710e+000.0137265.033.63%228.929.21%motif file (matrix) pdf
65NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-5.592e+000.0151514.065.23%474.960.58%motif file (matrix) pdf
66Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer1e-2-5.537e+000.0157221.028.05%187.423.90%motif file (matrix) pdf
67Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-2-5.509e+000.0160668.084.77%635.681.09%motif file (matrix) pdf
68Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer1e-2-5.484e+000.0161468.059.39%428.554.67%motif file (matrix) pdf
69Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-2-5.433e+000.016787.011.04%65.58.35%motif file (matrix) pdf
70Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-2-5.400e+000.0170373.047.34%334.642.69%motif file (matrix) pdf
71IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-2-5.335e+000.017943.05.46%28.63.65%motif file (matrix) pdf
72NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-5.331e+000.0179236.029.95%202.425.82%motif file (matrix) pdf
73AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-5.266e+000.0187439.055.71%400.251.06%motif file (matrix) pdf
74GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-2-5.189e+000.0199110.013.96%86.210.99%motif file (matrix) pdf
75Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-2-5.082e+000.0219478.060.66%440.356.17%motif file (matrix) pdf
76AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-5.067e+000.0219172.021.83%143.918.35%motif file (matrix) pdf
77Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-2-4.996e+000.0232162.020.56%134.317.13%motif file (matrix) pdf
78VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer1e-2-4.903e+000.025174.09.39%55.97.13%motif file (matrix) pdf
79Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-4.895e+000.0251408.051.78%371.547.40%motif file (matrix) pdf
80TATA-Box(TBP)/Promoter/Homer1e-2-4.871e+000.0253311.039.47%276.135.22%motif file (matrix) pdf
81Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer1e-2-4.684e+000.0301179.022.72%151.819.36%motif file (matrix) pdf