Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/human/results/FF_12238-129G6/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 768, Total Background Sequences = 771
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-17-3.917e+010.0000128.016.67%57.97.51%motif file (matrix) pdf
2BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-13-3.101e+010.0000190.024.74%111.314.45%motif file (matrix) pdf
3Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-13-3.022e+010.000093.012.11%40.45.24%motif file (matrix) pdf
4Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-11-2.637e+010.0000173.022.53%103.513.43%motif file (matrix) pdf
5Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-10-2.499e+010.0000194.025.26%122.515.89%motif file (matrix) pdf
6TATA-Box(TBP)/Promoter/Homer1e-10-2.461e+010.0000329.042.84%242.231.43%motif file (matrix) pdf
7AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-9-2.209e+010.0000202.026.30%133.117.27%motif file (matrix) pdf
8EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer1e-8-2.034e+010.0000223.029.04%154.320.03%motif file (matrix) pdf
9Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-7-1.798e+010.0000638.083.07%575.174.63%motif file (matrix) pdf
10Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-7-1.699e+010.000073.09.51%37.54.86%motif file (matrix) pdf
11TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer1e-7-1.640e+010.0000200.026.04%141.318.33%motif file (matrix) pdf
12TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-6-1.606e+010.0000279.036.33%213.627.71%motif file (matrix) pdf
13Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-5-1.369e+010.000097.012.63%59.67.73%motif file (matrix) pdf
14GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer1e-5-1.333e+010.0000127.016.54%84.210.92%motif file (matrix) pdf
15STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-5-1.325e+010.0000134.017.45%90.911.80%motif file (matrix) pdf
16Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer1e-5-1.285e+010.0000507.066.02%446.157.88%motif file (matrix) pdf
17NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer1e-5-1.270e+010.000094.012.24%58.17.53%motif file (matrix) pdf
18CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-5-1.243e+010.000191.011.85%56.77.36%motif file (matrix) pdf
19Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-5-1.225e+010.000178.010.16%47.06.10%motif file (matrix) pdf
20PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-5-1.199e+010.0001174.022.66%127.716.57%motif file (matrix) pdf
21TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-4-1.119e+010.0002181.023.57%135.517.58%motif file (matrix) pdf
22ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-4-1.116e+010.0002468.060.94%411.053.34%motif file (matrix) pdf
23MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-4-1.109e+010.0002379.049.35%322.141.80%motif file (matrix) pdf
24STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-4-1.094e+010.0002136.017.71%96.112.47%motif file (matrix) pdf
25EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-4-1.080e+010.0002372.048.44%316.741.10%motif file (matrix) pdf
26IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-4-1.074e+010.000245.05.86%23.43.04%motif file (matrix) pdf
27NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-4-1.053e+010.0003208.027.08%161.320.94%motif file (matrix) pdf
28Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer1e-4-1.020e+010.0004262.034.11%212.327.55%motif file (matrix) pdf
29AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer1e-4-1.018e+010.0004525.068.36%473.861.48%motif file (matrix) pdf
30Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-4-9.991e+000.0004190.024.74%146.218.97%motif file (matrix) pdf
31EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-4-9.961e+000.0004214.027.86%168.721.89%motif file (matrix) pdf
32NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-4-9.483e+000.0006218.028.39%173.722.54%motif file (matrix) pdf
33AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer1e-4-9.256e+000.0008683.088.93%648.484.13%motif file (matrix) pdf
34ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-3-9.206e+000.0008229.029.82%184.823.99%motif file (matrix) pdf
35IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer1e-3-8.445e+000.001639.05.08%21.42.78%motif file (matrix) pdf
36SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer1e-3-8.435e+000.001682.010.68%55.27.16%motif file (matrix) pdf
37MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer1e-3-8.356e+000.001777.010.03%51.76.71%motif file (matrix) pdf
38SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer1e-3-8.304e+000.0017724.094.27%699.590.76%motif file (matrix) pdf
39Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-3-8.263e+000.0017601.078.26%560.372.71%motif file (matrix) pdf
40Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-3-8.198e+000.0018360.046.88%313.340.65%motif file (matrix) pdf
41STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer1e-3-8.164e+000.0018105.013.67%75.99.84%motif file (matrix) pdf
42Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer1e-3-8.156e+000.0018496.064.58%450.258.42%motif file (matrix) pdf
43HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-3-8.076e+000.0019139.018.10%105.213.65%motif file (matrix) pdf
44ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-3-7.530e+000.003228.03.65%14.91.94%motif file (matrix) pdf
45Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-3-7.469e+000.0033109.014.19%80.610.46%motif file (matrix) pdf
46Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer1e-3-7.299e+000.0039139.018.10%107.513.95%motif file (matrix) pdf
47ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-3-7.198e+000.0042347.045.18%304.939.56%motif file (matrix) pdf
48Sp1(Zf)/Promoter/Homer1e-3-6.967e+000.0052342.044.53%300.238.96%motif file (matrix) pdf
49Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer1e-2-6.813e+000.0059289.037.63%249.732.40%motif file (matrix) pdf
50ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-2-6.632e+000.0070442.057.55%402.052.16%motif file (matrix) pdf
51RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer1e-2-6.576e+000.0072188.024.48%154.320.02%motif file (matrix) pdf
52Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer1e-2-6.379e+000.0086198.025.78%164.021.29%motif file (matrix) pdf
53Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-2-6.353e+000.0087395.051.43%355.646.15%motif file (matrix) pdf
54NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer1e-2-6.274e+000.009229.03.78%16.62.15%motif file (matrix) pdf
55KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-2-6.235e+000.0092610.079.43%577.074.88%motif file (matrix) pdf
56Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer1e-2-6.235e+000.0092610.079.43%577.274.90%motif file (matrix) pdf
57Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-2-6.158e+000.0098368.047.92%329.342.74%motif file (matrix) pdf
58NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-5.648e+000.016047.06.12%31.54.09%motif file (matrix) pdf
59STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer1e-2-5.628e+000.016188.011.46%67.08.69%motif file (matrix) pdf
60RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-2-5.067e+000.0277178.023.18%150.219.49%motif file (matrix) pdf
61NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer1e-2-4.883e+000.0328498.064.84%466.960.58%motif file (matrix) pdf
62BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-2-4.856e+000.0331159.020.70%133.717.35%motif file (matrix) pdf
63PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer1e-2-4.844e+000.033138.04.95%25.53.31%motif file (matrix) pdf
64Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-2-4.685e+000.0381230.029.95%201.626.16%motif file (matrix) pdf
65Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer1e-2-4.684e+000.0381357.046.48%325.742.26%motif file (matrix) pdf
66Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-4.652e+000.0382404.052.60%372.948.38%motif file (matrix) pdf
67IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-2-4.635e+000.0383116.015.10%94.212.22%motif file (matrix) pdf