Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/mouse/results/FF_57-7G5/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 3254, Total Background Sequences = 3255
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer1e-77-1.779e+020.0000493.015.15%195.36.00%motif file (matrix) pdf
2RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer1e-75-1.740e+020.0000475.014.59%186.65.73%motif file (matrix) pdf
3Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-51-1.183e+020.0000641.019.69%347.610.67%motif file (matrix) pdf
4X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-49-1.130e+020.0000395.012.14%175.85.40%motif file (matrix) pdf
5AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer1e-44-1.023e+020.00002152.066.11%1757.853.98%motif file (matrix) pdf
6MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer1e-42-9.683e+010.00002408.073.98%2041.362.68%motif file (matrix) pdf
7Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer1e-40-9.423e+010.0000812.024.95%513.515.77%motif file (matrix) pdf
8Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer1e-39-9.155e+010.0000887.027.25%580.617.83%motif file (matrix) pdf
9Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer1e-38-8.822e+010.0000697.021.41%427.113.12%motif file (matrix) pdf
10Sp1(Zf)/Promoter/Homer1e-38-8.775e+010.00001394.042.83%1040.631.95%motif file (matrix) pdf
11JunD(bZIP)/K562-JunD-ChIP-Seq/Homer1e-34-8.053e+010.0000301.09.25%137.14.21%motif file (matrix) pdf
12BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer1e-33-7.716e+010.00002100.064.52%1758.854.01%motif file (matrix) pdf
13c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-32-7.562e+010.0000605.018.59%371.011.39%motif file (matrix) pdf
14Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer1e-29-6.780e+010.00001101.033.82%811.924.93%motif file (matrix) pdf
15ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-20-4.757e+010.00001391.042.73%1132.034.76%motif file (matrix) pdf
16KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-19-4.404e+010.00002451.075.30%2216.368.05%motif file (matrix) pdf
17NRF(NRF)/Promoter/Homer1e-17-4.038e+010.0000774.023.78%578.617.77%motif file (matrix) pdf
18NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer1e-16-3.820e+010.0000758.023.29%569.017.47%motif file (matrix) pdf
19GFX(?)/Promoter/Homer1e-15-3.518e+010.000097.02.98%38.11.17%motif file (matrix) pdf
20ETS(ETS)/Promoter/Homer1e-15-3.486e+010.0000957.029.40%759.823.33%motif file (matrix) pdf
21Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-14-3.435e+010.00001082.033.24%877.126.93%motif file (matrix) pdf
22CRE(bZIP)/Promoter/Homer1e-14-3.380e+010.0000597.018.34%438.013.45%motif file (matrix) pdf
23NFY(CCAAT)/Promoter/Homer1e-13-3.117e+010.00001345.041.32%1138.734.97%motif file (matrix) pdf
24GFY-Staf(?,Zf)/Promoter/Homer1e-12-2.963e+010.0000230.07.07%138.24.24%motif file (matrix) pdf
25Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-12-2.867e+010.00001498.046.02%1296.139.80%motif file (matrix) pdf
26GFY(?)/Promoter/Homer1e-12-2.862e+010.0000223.06.85%134.64.13%motif file (matrix) pdf
27Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer1e-12-2.850e+010.00001532.047.07%1330.440.85%motif file (matrix) pdf
28GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer1e-11-2.613e+010.00001633.050.17%1439.144.19%motif file (matrix) pdf
29Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer1e-11-2.580e+010.0000219.06.73%135.24.15%motif file (matrix) pdf
30ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer1e-11-2.563e+010.0000225.06.91%140.84.32%motif file (matrix) pdf
31HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer1e-11-2.559e+010.0000373.011.46%262.98.07%motif file (matrix) pdf
32Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer1e-9-2.174e+010.00002404.073.86%2244.868.93%motif file (matrix) pdf
33ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer1e-9-2.093e+010.00001917.058.89%1746.453.63%motif file (matrix) pdf
34Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer1e-8-2.060e+010.00001051.032.29%896.927.54%motif file (matrix) pdf
35ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer1e-8-1.865e+010.00002489.076.47%2347.872.09%motif file (matrix) pdf
36Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-7-1.787e+010.00001939.059.57%1783.154.75%motif file (matrix) pdf
37EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer1e-7-1.785e+010.00001044.032.07%901.227.67%motif file (matrix) pdf
38ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer1e-7-1.679e+010.00001205.037.02%1061.032.58%motif file (matrix) pdf
39EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-7-1.618e+010.0000448.013.76%352.610.83%motif file (matrix) pdf
40PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer1e-6-1.597e+010.0000222.06.82%155.54.78%motif file (matrix) pdf
41ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer1e-6-1.505e+010.0000709.021.78%596.418.31%motif file (matrix) pdf
42Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer1e-6-1.478e+010.00001742.053.52%1601.549.18%motif file (matrix) pdf
43Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-5-1.343e+010.0000509.015.64%417.812.83%motif file (matrix) pdf
44ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer1e-5-1.341e+010.00001618.049.71%1485.145.60%motif file (matrix) pdf
45Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-5-1.306e+010.0000853.026.21%741.822.78%motif file (matrix) pdf
46ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer1e-5-1.303e+010.00002053.063.07%1926.059.14%motif file (matrix) pdf
47HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer1e-5-1.269e+010.0000315.09.68%245.07.52%motif file (matrix) pdf
48Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer1e-5-1.239e+010.00001168.035.88%1048.032.18%motif file (matrix) pdf
49Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer1e-5-1.175e+010.00001791.055.02%1668.151.22%motif file (matrix) pdf
50USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-5-1.174e+010.0000762.023.41%662.020.33%motif file (matrix) pdf
51MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-4-1.041e+010.00021247.038.31%1137.634.93%motif file (matrix) pdf
52Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer1e-4-9.349e+000.0004266.08.17%211.86.50%motif file (matrix) pdf
53THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer1e-3-9.119e+000.0005656.020.15%574.417.64%motif file (matrix) pdf
54Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer1e-3-8.767e+000.00082412.074.10%2320.571.26%motif file (matrix) pdf
55ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer1e-3-8.542e+000.0009207.06.36%161.34.95%motif file (matrix) pdf
56STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer1e-3-7.628e+000.00231154.035.45%1065.532.72%motif file (matrix) pdf
57c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-3-7.431e+000.0027960.029.49%877.126.93%motif file (matrix) pdf
58ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer1e-3-7.377e+000.00282024.062.18%1934.759.41%motif file (matrix) pdf
59bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-3-7.275e+000.0031564.017.33%497.815.29%motif file (matrix) pdf
60PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-3-7.236e+000.00321273.039.11%1185.136.39%motif file (matrix) pdf
61Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer1e-3-6.997e+000.00402896.088.97%2838.487.16%motif file (matrix) pdf
62LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer1e-2-6.807e+000.004790.02.76%64.51.98%motif file (matrix) pdf
63E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer1e-2-6.613e+000.00561362.041.84%1278.439.26%motif file (matrix) pdf
64NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-6.610e+000.00561004.030.84%926.528.45%motif file (matrix) pdf
65Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-2-6.567e+000.005748.01.47%31.00.95%motif file (matrix) pdf
66Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer1e-2-6.481e+000.00611980.060.83%1897.958.28%motif file (matrix) pdf
67Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer1e-2-6.394e+000.00661035.031.80%958.529.43%motif file (matrix) pdf
68Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-2-6.329e+000.00692897.089.00%2843.387.31%motif file (matrix) pdf
69E-box(bHLH)/Promoter/Homer1e-2-6.255e+000.0074206.06.33%168.95.19%motif file (matrix) pdf
70Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-2-5.836e+000.0110202.06.21%166.25.10%motif file (matrix) pdf
71SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer1e-2-5.829e+000.01101477.045.38%1399.342.97%motif file (matrix) pdf
72EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-2-5.772e+000.01141623.049.86%1545.747.46%motif file (matrix) pdf
73CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer1e-2-5.751e+000.0115770.023.66%706.021.68%motif file (matrix) pdf
74RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer1e-2-5.679e+000.0122823.025.28%757.223.25%motif file (matrix) pdf
75CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-2-5.643e+000.0125833.025.59%767.423.56%motif file (matrix) pdf
76Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer1e-2-5.564e+000.0133752.023.10%689.721.18%motif file (matrix) pdf
77STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-2-5.477e+000.0143652.020.03%594.018.24%motif file (matrix) pdf
78Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer1e-2-5.371e+000.0157922.028.33%856.826.31%motif file (matrix) pdf
79Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer1e-2-5.322e+000.016360.01.84%43.01.32%motif file (matrix) pdf
80E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer1e-2-5.290e+000.0166792.024.33%730.122.42%motif file (matrix) pdf
81TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer1e-2-5.039e+000.02111015.031.18%950.629.19%motif file (matrix) pdf
82TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-2-4.972e+000.0223618.018.99%564.517.34%motif file (matrix) pdf
83EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-2-4.861e+000.02461737.053.36%1668.151.22%motif file (matrix) pdf
84Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer1e-2-4.859e+000.02461614.049.59%1545.147.44%motif file (matrix) pdf
85Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer1e-2-4.857e+000.02461633.050.17%1564.248.03%motif file (matrix) pdf
86NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-2-4.829e+000.024648.01.47%33.61.03%motif file (matrix) pdf
87E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer1e-2-4.768e+000.02581264.038.83%1198.236.79%motif file (matrix) pdf