Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/mouse/results/FF_645-26G9/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 281, Total Background Sequences = 273
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-11-2.546e+010.0000210.074.73%150.455.09%motif file (matrix) pdf
2Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer1e-10-2.321e+010.000081.028.83%38.614.14%motif file (matrix) pdf
3Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-9-2.289e+010.000036.012.81%10.94.00%motif file (matrix) pdf
4HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer1e-9-2.212e+010.000088.031.32%44.216.19%motif file (matrix) pdf
5Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer1e-7-1.663e+010.000080.028.47%43.615.98%motif file (matrix) pdf
6Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer1e-6-1.467e+010.0000114.040.57%73.927.07%motif file (matrix) pdf
7MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-5-1.365e+010.0000166.059.07%122.945.02%motif file (matrix) pdf
8KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer1e-5-1.361e+010.0000216.076.87%173.363.50%motif file (matrix) pdf
9TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-5-1.334e+010.000012.04.27%2.81.03%motif file (matrix) pdf
10Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-5-1.257e+010.0001204.072.60%162.459.50%motif file (matrix) pdf
11Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-4-1.067e+010.0006252.089.68%219.780.50%motif file (matrix) pdf
12IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer1e-4-1.064e+010.000652.018.51%28.210.35%motif file (matrix) pdf
13Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-4-1.062e+010.0006150.053.38%112.741.29%motif file (matrix) pdf
14Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-4-1.045e+010.0006117.041.64%82.130.09%motif file (matrix) pdf
15Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-4-9.697e+000.001134.012.10%16.35.96%motif file (matrix) pdf
16MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-4-9.545e+000.0012123.043.77%89.632.84%motif file (matrix) pdf
17GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer1e-3-8.987e+000.0019136.048.40%102.737.63%motif file (matrix) pdf
18PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-3-7.981e+000.0050137.048.75%105.238.53%motif file (matrix) pdf
19E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-7.926e+000.0050204.072.60%171.262.73%motif file (matrix) pdf
20Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-3-7.490e+000.007442.014.95%24.38.90%motif file (matrix) pdf
21Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-3-6.920e+000.012455.019.57%35.913.14%motif file (matrix) pdf
22Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer1e-2-6.708e+000.0147155.055.16%125.245.87%motif file (matrix) pdf
23EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer1e-2-6.652e+000.0148159.056.58%129.347.38%motif file (matrix) pdf
24RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-2-6.627e+000.0148161.057.30%132.048.35%motif file (matrix) pdf
25Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-2-6.217e+000.021128.09.96%16.05.85%motif file (matrix) pdf
26ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer1e-2-6.035e+000.024313.04.63%5.31.96%motif file (matrix) pdf
27Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer1e-2-6.035e+000.024394.033.45%70.225.71%motif file (matrix) pdf
28IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer1e-2-5.924e+000.024322.07.83%11.14.06%motif file (matrix) pdf
29NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer1e-2-5.924e+000.024322.07.83%11.94.38%motif file (matrix) pdf
30Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer1e-2-5.750e+000.028082.029.18%60.922.30%motif file (matrix) pdf
31EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-2-5.613e+000.031150.017.79%33.112.14%motif file (matrix) pdf
32Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-2-5.607e+000.0311232.082.56%206.675.68%motif file (matrix) pdf
33Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-2-5.335e+000.0386246.087.54%222.481.48%motif file (matrix) pdf
34Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer1e-2-5.301e+000.038737.013.17%23.48.58%motif file (matrix) pdf
35NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer1e-2-5.238e+000.0400130.046.26%105.738.72%motif file (matrix) pdf
36EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer1e-2-5.178e+000.041343.015.30%28.310.37%motif file (matrix) pdf
37Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-2-5.120e+000.042725.08.90%14.25.21%motif file (matrix) pdf
38Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer1e-2-5.116e+000.0427208.074.02%182.666.89%motif file (matrix) pdf
39PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer1e-2-5.034e+000.0441198.070.46%172.963.34%motif file (matrix) pdf
40p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer1e-2-4.948e+000.046851.018.15%35.412.96%motif file (matrix) pdf
41NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer1e-2-4.945e+000.046872.025.62%53.319.54%motif file (matrix) pdf
42Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer1e-2-4.926e+000.046822.07.83%12.84.70%motif file (matrix) pdf
43AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer1e-2-4.859e+000.0476131.046.62%107.239.26%motif file (matrix) pdf
44Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer1e-2-4.843e+000.047666.023.49%48.117.63%motif file (matrix) pdf
45BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-4.783e+000.049167.023.84%49.418.08%motif file (matrix) pdf
46AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-2-4.734e+000.050576.027.05%57.320.97%motif file (matrix) pdf