Homer Known Motif Enrichment Results (/state/partition1/dave/CAGEd_oPOSSUM/analysis/mouse/results/FF_692-21D1/homer_output)

Known Motif Enrichment Results (txt file)
Total Target Sequences = 398, Total Background Sequences = 389
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File PDF
1Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer1e-16-3.842e+010.0000108.027.14%45.511.71%motif file (matrix) pdf
2Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer1e-13-3.202e+010.0000106.026.63%48.712.51%motif file (matrix) pdf
3MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer1e-8-1.861e+010.0000230.057.79%169.543.59%motif file (matrix) pdf
4PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer1e-7-1.797e+010.0000105.026.38%60.915.65%motif file (matrix) pdf
5Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer1e-7-1.617e+010.0000173.043.47%120.931.08%motif file (matrix) pdf
6Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-6-1.473e+010.0000368.092.46%326.984.07%motif file (matrix) pdf
7MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer1e-6-1.435e+010.0000185.046.48%134.334.54%motif file (matrix) pdf
8Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer1e-6-1.408e+010.0000233.058.54%180.146.31%motif file (matrix) pdf
9Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer1e-4-1.100e+010.000550.012.56%26.46.80%motif file (matrix) pdf
10Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer1e-4-1.097e+010.0005287.072.11%241.662.11%motif file (matrix) pdf
11Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer1e-4-1.069e+010.0005205.051.51%160.141.16%motif file (matrix) pdf
12E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer1e-4-1.026e+010.0008266.066.83%221.256.86%motif file (matrix) pdf
13Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-4-9.669e+000.0013142.035.68%105.026.99%motif file (matrix) pdf
14TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer1e-4-9.646e+000.0013103.025.88%70.018.01%motif file (matrix) pdf
15Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-4-9.404e+000.001557.014.32%33.38.56%motif file (matrix) pdf
16AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer1e-3-9.197e+000.0017116.029.15%82.321.16%motif file (matrix) pdf
17Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer1e-3-8.803e+000.002327.06.78%12.03.09%motif file (matrix) pdf
18Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer1e-3-8.464e+000.003173.018.34%47.812.29%motif file (matrix) pdf
19Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-3-8.368e+000.003238.09.55%20.55.27%motif file (matrix) pdf
20RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer1e-3-8.361e+000.0032220.055.28%180.546.42%motif file (matrix) pdf
21NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer1e-3-8.262e+000.003293.023.37%64.516.58%motif file (matrix) pdf
22NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer1e-3-8.000e+000.004011.02.76%3.50.90%motif file (matrix) pdf
23PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-3-7.941e+000.0041196.049.25%158.740.79%motif file (matrix) pdf
24Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-3-7.298e+000.0074344.086.43%311.480.06%motif file (matrix) pdf
25Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer1e-2-6.509e+000.0157345.086.68%314.080.75%motif file (matrix) pdf
26PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer1e-2-6.014e+000.024837.09.30%22.75.84%motif file (matrix) pdf
27Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer1e-2-5.945e+000.025622.05.53%11.32.90%motif file (matrix) pdf
28CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan et al.)/Homer1e-2-5.899e+000.025958.014.57%39.410.13%motif file (matrix) pdf
29EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer1e-2-5.369e+000.042452.013.07%35.49.11%motif file (matrix) pdf
30Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer1e-2-5.288e+000.04457.01.76%2.70.68%motif file (matrix) pdf
31Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer1e-2-5.054e+000.054334.08.54%21.15.42%motif file (matrix) pdf
32STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer1e-2-4.959e+000.057986.021.61%65.816.93%motif file (matrix) pdf
33Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer1e-2-4.911e+000.058935.08.79%22.35.73%motif file (matrix) pdf
34STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer1e-2-4.616e+000.076885.021.36%65.016.72%motif file (matrix) pdf